Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015918375.1_cds_XP_016467844.1_60549
CDS Infomation

[gene=LOC107790428] [db_xref=GeneID:107790428] [protein=DEAD-box ATP-dependent RNA helicase 17-like isoform X3] [protein_id=XP_016467844.1] [location=join(15515..15526,15946..16051,16878..16986,17073..17428,17512..17585,17719..18023,18364..18610,19415..19660)] [gbkey=CDS]
Sequence

ATGGTACTTTTGGTGTATGAGATCTTGCAAAAGTTGTTGCACCGTTTTCACTGGATTGTT
CCTGGCTATATTATGGGAGGGGAAAACAGGAACAAAGAGAAAGCAAGATTGCGAAAAGGT
ATATCTATTCTTGTTGCAACTCCTGGACGTCTTTTGGATCACCTAAAAAACACATCATCA
TTCTTGTACACGAACCTGCGCTGGATAATTTTTGATGAAGCAGACAGAATTCTGGAACTT
GGATATGGTAAAGAGATTGAAGACATACTTAATATTCTGGGCTCTAAACCACAGAAACCT
GTTGGCAAGGATAACGCAACTTCACGGATTTCTGAGGTTCAGAGGCAAAATTTGCTGTTA
TCAGCTACATTAAATGAGAAAGTAAATGAGCTCGCTAAAATTAGTTTAGATAACCCAGTG
ATGGTTGGGCTTGACCAGAAAACAGAGCTACAGTTAACTCAGCAAGACATGGAACCAATG
GAATTTAATGGGAAGGATATATTAGGAAAAGATGGCAAACTACTGACTTCTTCAACTGAG
GAATATAAGCTTCCGACTCAGTTACTTCAGCGATATATAAAAGTTCCCTGTGGTTCTCGG
CTTGTAGTGCTTCTTGCAATTCTAAAACATCTGTTTGAGAAGGAGCCTTCCCAGAAGGTT
GTGGTGTTTTTTTCAACATGTGATGCTGTAGATTTTCATTACTCATTGGTGAGTGGATTT
CAGTTGCTCCCTCATCGGCAATCAGATATTGAAGACAAACAACTGTTTTTGAAATGCAAC
ACACTTCGGTTACATGGGAATATGAATCACGAGGACCGAAGAACTACATTCAATGCTTTT
AAAACAGAAAAATCAGCACTTCTGCTGTCCAGTGATGTTGCTGCTAGGGGCTTGGACTTT
CCAAAAGTTAGGTGTATTATACAGTATGATCCTCCAGGAGAGGCGACTGAATATGTGCAC
CGGGTAGGAAGAACTGCCCGCATAGGTGAAAAGGGAGATTCTTTATTGTTCCTACAGCCA
GTTGAAACTGATTACTTGCATGGCTTGGAGAAACATGGGGTGACTCTAACAGAGTATCCC
CTTCAGAAACTTTTGGATAGCTTTCCATTGTTTGGTATCAAGTACCACCCGAAGAATTTT
GTTTCAGTAGACACGCATCCCTGGGCTGTTTCTCTGCAGAGAGCATTGGAATCCTTTATA
TCATCAGAGCTAAAGATGAAGAAGATGGCACAAAATGCATTTTGCTCATGGGTTCGTGCA
TACACTGCCCATCGTGGTGAACTTAAAGGGATTTTTATGGTGAAGAAACTTCACTTGGGG
CATGTAGCAAGAAGTTTTGCATTGAAGGAACAACCATCTTTGGTTAATAAATCGCTCCAA
AAACAATCAAAGAAGAGGATGAGAGATCAGAAACATAACAACATATCGAAAAAGAGGAAA
GTTTCTAAAAGATGA

Peptide Sequence

PEP ID

XP_016467844.1
PEP Infomation

PREDICTED: DEAD-box ATP-dependent RNA helicase 17-like isoform X3 [Nicotiana tabacum]
Sequence

MVLLVYEILQKLLHRFHWIVPGYIMGGENRNKEKARLRKGISILVATPGRLLDHLKNTSS
FLYTNLRWIIFDEADRILELGYGKEIEDILNILGSKPQKPVGKDNATSRISEVQRQNLLL
SATLNEKVNELAKISLDNPVMVGLDQKTELQLTQQDMEPMEFNGKDILGKDGKLLTSSTE
EYKLPTQLLQRYIKVPCGSRLVVLLAILKHLFEKEPSQKVVVFFSTCDAVDFHYSLVSGF
QLLPHRQSDIEDKQLFLKCNTLRLHGNMNHEDRRTTFNAFKTEKSALLLSSDVAARGLDF
PKVRCIIQYDPPGEATEYVHRVGRTARIGEKGDSLLFLQPVETDYLHGLEKHGVTLTEYP
LQKLLDSFPLFGIKYHPKNFVSVDTHPWAVSLQRALESFISSELKMKKMAQNAFCSWVRA
YTAHRGELKGIFMVKKLHLGHVARSFALKEQPSLVNKSLQKQSKKRMRDQKHNNISKKRK
VSKR

Transcript Sequence

Gene sequence data has not been registered.